Faculty

DEPARTMENT OF CHEMISTRY, SEOUL NATIONAL UNIVERSITY.

Professor

Lee, Nam Ki

Single-Molecule & Cell Dynamics
LAB Website
OFFICE 503동 423호 / +82-2-880-2234
LAB 503-403,132 / +82-2-880-2235

Research Topic

The main research interest of our group is developing new single-molecule and single-cell imaging techniques for investigating various biological phenomena. We are using single-molecule FRET, single-vesicle assay, single-protein detection in a living cell, real-time single-protein tracking, and super-resolution imaging. Using these techniques, we are directly visualizing the cellular processes, such as transcriptional dynamics and the movement of DNA, in a living cell. We are also heavily investigating membrane protein interactions and their diffusional mode in a living cell. Not only the living cell system, we are also studying protein-DNA interactions at the single-molecule level. Finally, we are studying the molecular mechanism of Parkinson’s disease based on the interactions between alpha-Synuclein and SNARE-proteins

Education

  • Ph.D. Chemistry, Seoul National University, Seoul, Korea, 2005
  • M.S. Chemistry, Seoul National University, Seoul, Korea, 2000
  • B.S. Chemistry, Seoul National University, Seoul, Korea, 1998

Career

  • Associate Professor, Department of Chemistry, Seoul National University, Seoul, Korea, 2017-Present
  • Associate Professor, Department of Physics & School of Interdisciplinary Bioscience and Bioengineering, Pohang University of Science and Technology (POSTECH), Pohang, Korea, 2013-2017
  • Assistant Professor, Department of Physics & School of Interdisciplinary Bioscience and Bioengineering, Pohang University of Science and Technology (POSTECH), Pohang, Korea, 2009-2013
  • Postdoctoral Fellow, Harvard University, Cambridge, USA, 2006-2008
  • Visiting Scientist, U. C. Los Angeles, California, USA, 2002-2003

Papers

  1. "Single-molecule observation of ATP-independent SSB displacement by RecO in Deinococcus radiodurans", J. Hwang, J.-Y. Kim, C. Kim, S. park, S. Joo, S. K. Kim*, N. K. Lee*, eLife, 2020, 9, e50945.
  2. "Transcription and translation contribute to gene locus relocation to the nucleoid periphery in E.coli.” S. Yang, S. H. Kim, D.-K. Kim, H. J. An, J. B. Son, A. H. Gynnå, N. K. Lee, Nat. Commun. 2019, 10, 5131.
  3. “Dynamic release of bending stress in short dsDNA by a kink and forks”, C. Kim, O. Lee, J.-Y. Kim, W. Sung, N. K. Lee, Angew. Chem. Int. Ed. 2015, 31, 8943-8947.
  4. “Real-time submillisecond single-molecule FRET dynamics of freely diffusing molecules with liposome tethering”, J.-Y. Kim, C. Kim, N. K. Lee, Nat. Commun. 2015, 6, 6992.
  5. “Contribution of RNA polymerase concentration variation to protein expression noise”, S. Yang, S. H. Kim, Y. R. Lim, C. H. Kim, H. J. An, J-H Kim, J. Sung,* N. K Lee*, Nat. Commun. 2014, 5, 4761.
  6. “Large α-Synuclein oligomers inhibit neuronal SNARE-mediated vesicle docking”, B. K Choi, M. G. Choi, J. Y. Kim, Y. Yang, Y. Lai, D. H. Kweon, N. K. Lee,* Y. K. Shin*, Proc. Natl. Acad. Sci. USA 2013, 110, 4087-4092.

Search Papers

Sora Yang, Seunghyeon Kim, Dong-Kyun Kim, Hyeong Jeon An, Jung Bae Son, Nam Ki Lee
Nature Communications, 2019, 10, 1, (2019-11-12) Link
Do-Hyeon Kim, Soyeon Park, Dong-Kyun Kim, Min Gyu Jeong, Jungeun Noh, Yonghoon Kwon, Kai Zhou, Nam Ki Lee, Sung Ho Ryu
PLOS BIOLOGY, 2018, 16, 12, (2018-12-13) Link
Björn Hellenkamp, Sonja Schmid , Olga Doroshenko, Oleg Opanasyuk, Ralf Kühnemuth, Nam Ki Lee, 외53명, Jens Michaelis, Claus A. M. Seidel , Timothy D. Craggs, Thorsten Hugel
Nature Methods, 2018, 15, 9, (2018-09-01) Link
Keewon Sung, Jinho Park, Younggyu Kim, Nam Ki Lee, Seong Keun Kim
Journal of The American Chemical Society, 2018, 140, 25, (2018-06-27) Link
Mi-Jeong Kwak, J. Dongun Kim, Hyunmin Kim, Cheolhee Kim, James W. Bowman, Seonghoon Kim, Keehyoung Joo, Jooyoung Lee, Kyeong Sik Jin, Yeon-Gil Kim, Nam Ki Lee, Jae U. Jung, Byung-Ha Oh
Nature Microbiology, 2017, 2, (2017-07-17) Link
Do-Hyeon Kim, Dong-Kyun Kim, Kai Zhou, Soyeon Park, Yonghoon Kwon, Min Gyu Jeong, Nam Ki Lee, Sung Ho Ryu
Chemical Science, 2017, 8, 7, (2017-07-01) Link
Sungwook Jung, Joonhyuck Park, Jiwon Bang, Jae-Yeol Kim, Cheolhee Kim, Yongmoon Jeon, Seung Hwan Lee, Ho Jin, Sukyung Choi, Bomi Kim, Woo Jin Lee, Chan-Gi Pack, Jong-Bong Lee, Nam Ki Lee, Sungjee Kim
Journal of The American Chemical Society, 2017, 139, 22, (2017-06-07) Link
O.-chul Lee, Cheolhee Kim, Jae-Yeol Kim, Nam Ki Lee, Wokyung Sung
Scientific Reports, 2016, 6, 28239, (2016-06-24) Link
Giyoung Shin, Dong‐Kyun Kim, Junsang Doh, Daeyeon Lee, Nam Ki Lee, Gyoo Yeol Jung
Electrophoresis, 2016, 37, 4, (2016-02-01) Link
Hyoun Sook Kim, Ha Na Im, Doo Ri An, Ji Young Yoon, Jun Young Jang, Shahriar Mobashery, Dusan Hesek, Mijoon Lee, Jakyung Yoo, Minghua Cui, Sun Choi, Cheolhee Kim, Nam Ki Lee, Soon-Jong Kim, Jin Young Kim, Geul Bang, Byung Woo Han, Byung Il Lee, Hye Jin Yoon, Se Won Suh
J. Biol. Chem., 2015, 290, 41, (2015-10-09) Link