Faculty

DEPARTMENT OF CHEMISTRY, SEOUL NATIONAL UNIVERSITY.

Professor

Lee, Nam Ki

Single-Molecule & Cell Dynamics
LAB Website
OFFICE 503동 423호 / +82-2-880-2234
LAB 503-403,132 / +82-2-880-2235

Research Topic

The main research interest of our group is developing new single-molecule and single-cell imaging techniques for investigating various biological phenomena. We are using single-molecule FRET, single-vesicle assay, single-protein detection in a living cell, real-time single-protein tracking, and super-resolution imaging. Using these techniques, we are directly visualizing the cellular processes, such as transcriptional dynamics and the movement of DNA, in a living cell. We are also heavily investigating membrane protein interactions and their diffusional mode in a living cell. Not only the living cell system, we are also studying protein-DNA interactions at the single-molecule level. Finally, we are studying the molecular mechanism of Parkinson’s disease based on the interactions between alpha-Synuclein and SNARE-proteins

Education

  • Ph.D. Chemistry, Seoul National University, Seoul, Korea, 2005
  • M.S. Chemistry, Seoul National University, Seoul, Korea, 2000
  • B.S. Chemistry, Seoul National University, Seoul, Korea, 1998

Career

  • Associate Professor, Department of Chemistry, Seoul National University, Seoul, Korea, 2017-Present
  • Associate Professor, Department of Physics & School of Interdisciplinary Bioscience and Bioengineering, Pohang University of Science and Technology (POSTECH), Pohang, Korea, 2013-2017
  • Assistant Professor, Department of Physics & School of Interdisciplinary Bioscience and Bioengineering, Pohang University of Science and Technology (POSTECH), Pohang, Korea, 2009-2013
  • Postdoctoral Fellow, Harvard University, Cambridge, USA, 2006-2008
  • Visiting Scientist, U. C. Los Angeles, California, USA, 2002-2003

Papers

  1. "Single-molecule observation of ATP-independent SSB displacement by RecO in Deinococcus radiodurans", J. Hwang, J.-Y. Kim, C. Kim, S. park, S. Joo, S. K. Kim*, N. K. Lee*, eLife, 2020, 9, e50945.
  2. "Transcription and translation contribute to gene locus relocation to the nucleoid periphery in E.coli.” S. Yang, S. H. Kim, D.-K. Kim, H. J. An, J. B. Son, A. H. Gynnå, N. K. Lee, Nat. Commun. 2019, 10, 5131.
  3. “Dynamic release of bending stress in short dsDNA by a kink and forks”, C. Kim, O. Lee, J.-Y. Kim, W. Sung, N. K. Lee, Angew. Chem. Int. Ed. 2015, 31, 8943-8947.
  4. “Real-time submillisecond single-molecule FRET dynamics of freely diffusing molecules with liposome tethering”, J.-Y. Kim, C. Kim, N. K. Lee, Nat. Commun. 2015, 6, 6992.
  5. “Contribution of RNA polymerase concentration variation to protein expression noise”, S. Yang, S. H. Kim, Y. R. Lim, C. H. Kim, H. J. An, J-H Kim, J. Sung,* N. K Lee*, Nat. Commun. 2014, 5, 4761.
  6. “Large α-Synuclein oligomers inhibit neuronal SNARE-mediated vesicle docking”, B. K Choi, M. G. Choi, J. Y. Kim, Y. Yang, Y. Lai, D. H. Kweon, N. K. Lee,* Y. K. Shin*, Proc. Natl. Acad. Sci. USA 2013, 110, 4087-4092.

Search Papers

O.-chul Lee, Cheolhee Kim, Jae-Yeol Kim, Nam Ki Lee, Wokyung Sung
Scientific Reports, 2016, 6, 28239, (2016-06-24) Link
Giyoung Shin, Dong‐Kyun Kim, Junsang Doh, Daeyeon Lee, Nam Ki Lee, Gyoo Yeol Jung
Electrophoresis, 2016, 37, 4, (2016-02-01) Link
Hyoun Sook Kim, Ha Na Im, Doo Ri An, Ji Young Yoon, Jun Young Jang, Shahriar Mobashery, Dusan Hesek, Mijoon Lee, Jakyung Yoo, Minghua Cui, Sun Choi, Cheolhee Kim, Nam Ki Lee, Soon-Jong Kim, Jin Young Kim, Geul Bang, Byung Woo Han, Byung Il Lee, Hye Jin Yoon, Se Won Suh
J. Biol. Chem., 2015, 290, 41, (2015-10-09) Link
Yu Rim Lim, Ji-Hyun Kim, Seong Jun Park, Gil-Suk Yang, Sanggeun Song, Suk-Kyu Chang, Nam Ki Lee, Jaeyoung Sung
PHYSICAL REVIEW X, 2015, 5, 3, (2015-08-10) Link
Do-Hyeon Kim, Kai Zhou, Dong-Kyun Kim, Soyeon Park, Jungeun Noh, Yonghoon Kwon, Dayea Kim, Nam Woong Song, Jong-Bong Lee, Pann-Ghill Suh, Nam Ki Lee, Sung Ho Ryu
Angew. Chem. Int. Ed. , 2015, 54, 24, (2015-06-08) Link
Cheolhee Kim, O‐chul Lee, Jae‐Yeol Kim, Wokyung Sung, Nam Ki Lee
Angew. Chem. Int. Ed., 2015, 54, 31, (2015-06-05) Link
Jae-Yeol Kim, Cheolhee Kim, Nam Ki Lee
Nature Communications, 2015, 6, 6992, (2015-04-24) Link
Young-Min Soh, Frank Bürmann, Ho-Chul Shin, Takashi Oda, Kyeong Sik Jin, Christopher P Toseland, Cheolhee Kim, Hansol Lee, Soo Jin Kim, Min-Seok Kong, Marie-Laure Durand-Diebold, Yeon-Gil Kim, Ho Min Kim, Nam Ki Lee, Mamoru Sato, Byung-Ha Oh, Stephan Gruber
Molecular Cell, 2015, 57, 2, (2015-01-01) Link
Sora Yang, Seunghyeon Kim, Yu Rim Lim, Cheolhee Kim, Hyeong Jeon An, Ji-Hyun Kim, Jaeyoung Sung, Nam Ki Lee
Nature Communications, 2014, 5, 4761, (2014-09-01) Link